A dog's phenotype describes the way it appears physically. A dog's genotype describes the genetics behind the physical characteristics. It might help to remember this as PHenotype = PHysical and GENotype = GENes.
One can easily ascertain a dog's phenotype simply by looking at it but the genotype takes a bit more digging in some cases. You can deduce it with varying degrees of accuracy by looking at anecdotal breeding information. The more definitive option is to have a dog tested through the services of companies like Vetgen in Ann Arbor, MI. The test requires a cheek swab as is commonly used for standard DNA testing and results are usually available in a week or so.
This topic relates to Portuguese pointers primarily due to the fact that there is a simple recessive gene for brown pigmentation of the skin usually accompanied by a light eye color still lurking in many - if not most! - pedigrees. (We aren't talking about coat color here as that is a whole different set of genes and in modern day Portuguese pointers, only yellow coats exist.) This coloring is referred to as "lemon" in [English] pointers. If you've perused our C Litter puppy pictures, you've seen the results with Chamusca who bears the brown pigmentation. Here is the very basic science behind how two yellow-coated dogs with black skin pigmented, known as "orange" in [English] pointers, when bred together, can produce brown-pigmented offspring.
Color genes can be represented as pairs of letters. The letter B will represent black skin pigment and b means brown skin pigment. Whenever a B is present in the pair, as black is dominant, the result will be a dog with black skin pigmentation, regardless of whether the other letter is B or b. It's only when the pairing consists of bb that the brown skin pigment will be expressed.
In the case of our C Litter which produced a puppy with brown skin pigment (a brown nose, lips and eye rims), Chamusca, we know her genotype must be bb. As each parent contributes one of the genes to the pair, we therefore know that both Haizen and Rena must carry the b gene. Since they both have black skin, we can easily deduce that the other gene in their pairs must be B and, therefore, their genotypes are be Bb.
With this combination (Bb x Bb), the following distribution should result:
BBBb or bBbb 25% 50% 25%
Based on what you know about the effect of B on the physical color, you'll see that theoretically 75% of the puppies should be black (BB, Bb or bB). We have since had Constancia and Cadaval tested and they are Bb and BB, respectively. If there had been a fourth puppy and the odds had played out true, that puppy would have been Bb and black as well. But probabilities being what they are, it's difficult in this instance to determine what you will get and Chamusca could have as easily been BB or Bb! This is why anecdotally determining genotype of black-pigmented dogs used for breeding can be difficult if the tell-tale brownie isn't produced!
As an interesting note, Cadaval being BB can never produce a brown pup, regardless of which genotype she is bred to, including a brown-pigmented dog. Likewise, if Chamusca as a bb were bred to a BB dog, she would not produce brown pups, either.
And if you're ready to advance your understanding of genetics in Portuguese pointers, there's the issue of long hairs and short hairs! Fortunately the genetics behind coat length appear pretty straightforward as well with the long hair being a simple recessive, meaning both parents have to carry carry a copy of the long hair gene to produce long hair pups. And, there's also simple DNA test also utilizing a cheek swab.